Metabolite identifier type label used in Chalmers Sysbio GEM

Metabolite identifier type label used in Chalmers Sysbio GEM

Usage

chalmers_gem_id_type(label)

Arguments

label

Character: an ID type label, as shown in the table at translate_ids

Value

Character: the Chalmers GEM specific ID type label, or the input unchanged if it could not be translated (still might be a valid identifier name). These labels should be column names from the "metabolites.tsv" distributed with the GEMs.

See also

• hmdb_id_type

• uniprot_id_type

• ensembl_id_type

• uploadlists_id_type

Examples

chalmers_gem_id_type("metabolicatlas")
#> [1] "metsNoComp"
# [1] "metsNoComp"