Organism names and identifiers from Ensembl

A table with various taxon names and identifiers: English common names, latin (scientific) names, Ensembl organism IDs and NCBI taxonomy IDs.

Usage

ensembl_organisms()

Value

A data frame with the above mentioned columns.

Examples

ens_org <- ensembl_organisms()
ens_org
#> # A tibble: 317 × 4
#>    common_name                    latin_name              ncbi_tax_id ensembl_id
#>    <chr>                          <chr>                         <int> <chr>     
#>  1 Abingdon island giant tortoise Chelonoidis abingdonii       106734 cabingdon…
#>  2 African ostrich                Struthio camelus austr…      441894 scaustral…
#>  3 Agassiz's desert tortoise      Gopherus agassizii            38772 gagassizii
#>  4 Algerian mouse                 Mus spretus                   10096 mspretus  
#>  5 Alpaca                         Vicugna pacos                 30538 vpacos    
#>  6 Alpine marmot                  Marmota marmota marmota        9994 mmmarmota 
#>  7 Amazon molly                   Poecilia formosa              48698 pformosa  
#>  8 American beaver                Castor canadensis             51338 ccanadens…
#>  9 American bison                 Bison bison bison             43346 bbbison   
#> 10 American black bear            Ursus americanus               9643 uamerican…
#> # ℹ 307 more rows