Retrieves a list of available resources in the annotations database of OmniPath
Source:R/annotations.R
get_annotation_resources.Rd
Get the names of the resources from https://omnipath.org/annotations.
Examples
get_annotation_resources()
#> [1] "Adhesome" "Almen2009" "Baccin2019"
#> [4] "CORUM_Funcat" "CORUM_GO" "CSPA"
#> [7] "CSPA_celltype" "CancerDrugsDB" "CancerGeneCensus"
#> [10] "CancerSEA" "CellCall" "CellCellInteractions"
#> [13] "CellChatDB" "CellChatDB_complex" "CellPhoneDB"
#> [16] "CellPhoneDB_complex" "CellTalkDB" "CellTypist"
#> [19] "Cellinker" "Cellinker_complex" "ComPPI"
#> [22] "CytoSig" "DGIdb" "DisGeNet"
#> [25] "EMBRACE" "Exocarta" "GO_Intercell"
#> [28] "GPCRdb" "Guide2Pharma" "HGNC"
#> [31] "HPA_secretome" "HPA_subcellular" "HPA_tissue"
#> [34] "HPMR" "HumanCellMap" "ICELLNET"
#> [37] "ICELLNET_complex" "IntOGen" "Integrins"
#> [40] "KEGG-PC" "Kirouac2010" "LOCATE"
#> [43] "LRdb" "MCAM" "MSigDB"
#> [46] "Matrisome" "MatrixDB" "Membranome"
#> [49] "NetPath" "OPM" "PROGENy"
#> [52] "PanglaoDB" "Phobius" "Phosphatome"
#> [55] "Ramilowski2015" "Ramilowski_location" "SIGNOR"
#> [58] "SignaLink_function" "SignaLink_pathway" "Surfaceome"
#> [61] "TCDB" "TFcensus" "TopDB"
#> [64] "UniProt_family" "UniProt_keyword" "UniProt_location"
#> [67] "UniProt_tissue" "UniProt_topology" "Vesiclepedia"
#> [70] "Zhong2015" "connectomeDB2020" "iTALK"
#> [73] "kinase.com" "scConnect" "scConnect_complex"
#> [76] "talklr"