Downloads and preprocesses network data from InWeb InBioMap
Source:R/inbiomap.R
inbiomap_download.Rd
Downloads the data by inbiomap_raw
, extracts the
UniProt IDs, Gene Symbols and scores and removes the irrelevant columns.
Arguments
- ...
Passed to
inbiomap_raw
.
Examples
if (FALSE) {
inbiomap_interactions <- inbiomap_download()
inbiomap_interactions
}
# # A tibble: 625,641 x 7
# uniprot_a uniprot_b genesymbol_a genesymbol_b inferred score1 score2
# <chr> <chr> <chr> <chr> <lgl> <dbl> <dbl>
# 1 A0A5B9 P01892 TRBC2 HLA-A FALSE 0.417 0.458
# 2 A0AUZ9 Q96CV9 KANSL1L OPTN FALSE 0.155 0.0761
# 3 A0AV02 P24941 SLC12A8 CDK2 TRUE 0.156 0.0783
# 4 A0AV02 Q00526 SLC12A8 CDK3 TRUE 0.157 0.0821
# 5 A0AV96 P0CG48 RBM47 UBC FALSE 0.144 0.0494
# # . with 625,631 more rows