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Builds signaling network prior knowledge using ConsensusPathDB (CPDB) data. Note, the interactions from CPDB are not directed and many of them comes from complex expansion. Find out more at http://cpdb.molgen.mpg.de/.

Usage

nichenet_signaling_network_cpdb(...)

Arguments

...

Passed to consensuspathdb_download.

Value

A network data frame (tibble) with signaling interactions suitable for use with NicheNet.

Examples

if (FALSE) {
# use some parameters stricter than default:
cpdb_signaling_network <- nichenet_signaling_network_cpdb(
    complex_max_size = 2,
    min_score = .99
)
}