Retrieves a list of intercellular communication resources available in OmniPath

Retrieves a list of the databases from https://omnipathdb.org/intercell.

Usage

intercell_resources(dataset = NULL)

Arguments

dataset

ignored at this query type

Value

character vector with the names of the databases

See also

• resources

• intercell

• filter_intercell

• intercell_categories

• intercell_generic_categories

• intercell_summary

• intercell_network

Examples

intercell_resources()
#>  [1] "Adhesome"             "Almen2009"            "Baccin2019"          
#>  [4] "CSPA"                 "CellCall"             "CellCellInteractions"
#>  [7] "CellChatDB"           "CellPhoneDB"          "CellTalkDB"          
#> [10] "Cellinker"            "ComPPI"               "DGIdb"               
#> [13] "EMBRACE"              "GO_Intercell"         "GPCRdb"              
#> [16] "Guide2Pharma"         "HGNC"                 "HPA_secretome"       
#> [19] "HPMR"                 "ICELLNET"             "Integrins"           
#> [22] "Kirouac2010"          "LOCATE"               "LRdb"                
#> [25] "MCAM"                 "Matrisome"            "MatrixDB"            
#> [28] "Membranome"           "OPM"                  "OmniPath"            
#> [31] "Phobius"              "Ramilowski2015"       "Ramilowski_location" 
#> [34] "SignaLink_function"   "Surfaceome"           "TopDB"               
#> [37] "UniProt_keyword"      "UniProt_location"     "UniProt_topology"    
#> [40] "Zhong2015"            "connectomeDB2020"     "iTALK"               
#> [43] "scConnect"            "talklr"